Following Shinya Fujita suggestion I did some more tests.
I am now using Probe Image (PI) (part of PFE) 1.2.2.1984.
What I've found is two fold - all using stage scanning:
(1) When jeol PRB scan is initially on. Probe Image now on starting changes the magnification to x15,000. Then it changes it to either a very high magnification beam >>100,000 or to a fixed beam - I can't tell based on fluorescence. During the mapping PRB scan light remains on but at the beginning of some (not all) lines flashes off.
(2) When jeol PRB scan is initially off. Probe Image does not change the initial magnification. It again then changes it to the very high magnification beam/fixed beam. PRB light again remains on & flashes off at the beginning of some lines.
Now the stage mapping fails when the magnification before switching to very high mag/fixed beam is less than between 3000-4000x. 1st few points of each line the beam is very high mag/fixed beam then it massively defocuses (but does not switch to rastering).
I tried the following:
(1) Set magnification on Jeol to x3000, PRB Scan off. Start PI (probe imagE) screen mag stays at 3000x. PRB Light on. Does not work - beam initially very high mag/fixed beam and then beam massively defocuses after 1st few points of each line - see video -
https://dl.dropboxusercontent.com/u/34045548/8b.mp4(2) Set magnification on Jeol to x4000, PRB scan off. Start PI screen mag stays at 4000x. PRB light on. Works fine beam remains at very high mag/fixed beam - see video -
https://dl.dropboxusercontent.com/u/34045548/9b.mp4I also tried: x230 PRB off - failed; x1000 PRB off - failed; x5000 PRB off - works.
It only fails when PRB scanning is turned off when the map is started in probe image. This is beacuse Probe Image now sets the initial magnification to 15,000 when PRB scanning is turned on prior to clicking start in probe image.
An example: Set mag to x230, PRB on. Start PI. It changes the screen magnification to 15,000. Then to the very high mag/fixed beam. And it works.
Many thanks
Ben